Theory of Mossbauer spectra of proteins fluctuating between conformational substates.

Protein conformational populations and functionally relevant substates.

Functioning proteins do not remain fixed in a unique structure, but instead they sample a range of conformations facilitated by motions within the protein. Even in the native state, a protein exists as a collection of interconverting conformations driven by thermodynamic fluctuations. Motions on the fast time scale allow a protein to sample conformations in the nearby area of its conformational...

Spectral hole burning and selection of conformational substates in chromoproteins.

We investigated spectral holes burnt at 1.5 K into the origins of several tautomeric forms of mesoporphyrin IX-substituted horseradish peroxidase at pH 8 under pressures up to 2 MPa. From the pressure-induced lineshift the compressibility of the apoprotein could be determined. We found that the compressibility changed significantly when measured at different tautomer origins. It was concluded t...

Molecular dynamics of conformational substates for a simplified protein model

Mossbauer Spectra of Soil Kaolins from South-western Australia

-Six well-characterized soil kaolins from widely separated sites in south-western Australia and four reference kaolins were studied by 57Fe M6ssbauer spectroscopy at room temperature after removal of non-structurally-bound iron with dithionite-citrate-bicarbonate solution. The soil kaolins and one of the reference kaolins were also studied at temperatures near 16 K. The soil kaolins were remark...

Conformational switching between protein substates studied with 2D IR vibrational echo spectroscopy and molecular dynamics simulations.

Myoglobin is an important protein for the study of structure and dynamics. Three conformational substates have been identified for the carbonmonoxy form of myoglobin (MbCO). These are manifested as distinct peaks in the IR absorption spectrum of the CO stretching mode. Ultrafast 2D IR vibrational echo chemical exchange experiments are used to observed switching between two of these substates, A...